Professor Xavier Didelot
Professor of Statistical Epidemiology and Genomics
Email:
Phone: 024 765 23539
Office: (Mathematical Sciences) MB5.16 / GH: B006
Twitter:
Research Clusters
Microbiology & Infectious Disease
Warwick Centres and GRPs
Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research (SBIDER)
Health Protection Research Unit (HPRU) in Genomics and Enabling Data
Vacancies and Opportunities
For PhD and postdoctoral opportunities, and interest in potential collaborations, please contact me at the above email address.
Research Interests
My research is concerned with understanding the way bacterial pathogens evolve, spread and cause disease. I have analysed both epidemiological and genomic data from a wide range of bacteria. A key aim is to develop new bioinformatics and statistical methods that can handle the very large amounts of data made available by novel high-throughput sequencing techniques.
I have worked on a wide range of bacterial pathogens, especially those causing healthcare associated infections (eg Clostridium difficile and Staphylococcus aureus ) and gastrointestinal infections (eg Salmonella enterica, Bacillus cereus, Campylobacter jejuni and Helicobacter pylori).
My work often requires to develop new statistical methods of analysis, which I release as open source software in the hope that they will be useful to other researchers. I have developed or contributed to.
Research: Technical Summary
My research is focused on the analysis of genomic data in order to improve our understanding of bacterial evolution, epidemiology, ecology and pathogenicity. A key aim is to develop new bioinformatics and statistical methods that can handle the very large amounts of data made available by novel high-throughput sequencing techniques.
Because of the interdisciplinary nature of my work, I have broad interests in a variety of subjects, including theoretical topics such as mathematical population genetics, Bayesian statistics or Monte-Carlo methods, and biological topics such as bacterial evolutionary processes or pathogen epidemiology.
I share my time equally between the School of Life Sciences and the Department of Statistics. I am also a member of the Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research (SBIDER).
I lead the Health Protection Research Unit in Genomics and Enabling Data which is funded by the (NIHR) for 2020-25. This project is a partnership between the 神马福利影片 and the UK Health Security Agency, in collaboration with the Centre for Genomic Pathogen Surveillance and the University of Cambridge. Our aim is to provide the methodological backbone required to improve national public health using large scale genomic and epidemiological data.
- 2018-present: Professor of Statistical Epidemiology and Genomics, School of Life Sciences and Department of Statistics, 神马福利影片
- 2012-2018: Senior Lecturer, School of Public Health, Imperial College London
- 2010-2012: Leadership Fellow, Department of Statistics, University of Oxford
- 2007-2010: Research Fellow, Department of Statistics, 神马福利影片
- 2004-2007: Doctorate in Statistical Genetics, Department of Statistics, University of Oxford
Torres Ortiz, Arturo, Didelot, Xavier and Grandjean, Louis (2026) Microbial Genomics, 12 (4). 001690. doi: ISSN 2057-5858.
Rotheram, Suzanne, Trivett, Hannah, Whitehurst, Jane, Collins, Caitlin, Carson, Jake, Staniszewska, Sophie and Didelot, Xavier (2026) Microbial Genomics, 12 (4). 001691. doi: ISSN 2057-5858.
Didelot, Xavier, Carson, Jake, Ribeca, Paolo and Volz, Erik (2026) Molecular Biology and Evolution, 43 (4). msag093. doi: ISSN 0737-4038.
Fountain, Holly, Thorley, Katie, Reid, David, Ogaz, Dana, Richardson, Daniel, Charles, Hannah, Baker, Kate S., Jenkins, Claire, Pulford, Caisey V., Hughes, Gwenda, Field, Nigel, Mercer, Catherine H., Didelot, Xavier, McCarthy, Noel D., Mohammed, Hamish and Mitchell, Holly D. (2026) JMIR Public Health and Surveillance, 12 . e73762. doi: ISSN 2369-2960.
Adeoye, Matthew, Didelot, Xavier and Spencer, Simon E. F. (2026) Epidemics, 54 . 100879. doi: ISSN 1755-4365.
Craddock, Hannah, Spencer, Simon E. F. and Didelot, Xavier (2025) Infectious Disease Modelling, 10 (4). pp. 1418-1432. doi: ISSN 2468-0427.
Helekal, David, Koskela, Jere and Didelot, Xavier (2025) Systematic Biology, 74 (6). pp. 897-916. doi: ISSN 1063-5157.
Didelot, Xavier, Helekal, David and Roberts, Ian (2025) Journal of Theoretical Biology, 607 . 112109. doi: ISSN 0022-5193.
Carson, Jake, Keeling, Matthew James, Ribeca, Paolo and Didelot, Xavier (2025) Molecular Biology and Evolution, 42 (4). msaf083. doi: ISSN 0737-4038.
Yang, Zuyu, Davies, Heather, Clapham, Jane, Lopez, Liza, Bratcher, Holly B., Tiong, Audrey, Didelot, Xavier, Maiden, Martin C. J., Carter, Philip E. and Ren, Xiaoyun (2025) Infection, Genetics and Evolution, 129 . 105726. doi: ISSN 1567-1348.
Gill, Alicia, Koskela, Jere, Didelot, Xavier and Everitt, Richard G. (2025) Journal of the Royal Statistical Society Series C: Applied Statistics . doi: ISSN 1467-9876. (In Press)
Didelot, Xavier and Ribeca, Paolo (2025) Genome Biology (Online), 26 . 170. doi: ISSN 1474-760X.
Medina-Aguayo, F. J., Didelot, Xavier and Everitt, Richard G. (2024) Bayesian Analysis, 19 (4). pp. 1245-1275. doi: ISSN 1931-6690.
Kendall, Michelle, Ferretti, Luca, Wymant, Chris, Tsallis, Daphne, Petrie, James, Di Francia, Andrea, Di Lauro, Francesco, Abeler-D枚rner, Lucie, Manley, Harrison, Panovska-Griffiths, Jasmina, Ledda, Alice, Didelot, Xavier and Fraser, Christophe (2024) Science, 385 (6710). eadm8103. doi: ISSN 0036-8075.
Osman, Roeann, Dema, Emily, David, Alexandra, Hughes, Gwenda, Field, Nigel, Cole, Michelle, Didelot, Xavier and Saunders, John (2024) Journal of Infection, 88 (6). 106168. doi: ISSN 0163-4453.
Nair, Satheesh, Barker, Clare R., Bird, Matthew, Greig, David R., Collins, Caitlin, Painset, Ana茂s, Chattaway, Marie, Pickard, Derek, Larkin, Lesley, Gharbia, Saheer, Didelot, Xavier and Ribeca, Paolo (2024) Microbial Genomics, 10 (5). 001247. doi: ISSN 2057-5858.
Avila Cartes, Jorge, Bonizzoni, Paola, Ciccolella, Simone, Della Vedova, Gianluca, Denti, Luca, Didelot, Xavier, Monti, Davide, Pirola, Yuri and Valencia, Alfonso (2024) Bioinformatics, 40 (5). btae292. doi: ISSN 1367-4803.
Moore, Matthew P., Laager, Mirjam, Ribeca, Paolo and Didelot, Xavier (2024) PLoS Genetics, 20 (4). e1011184. doi: ISSN 1553-7390.
Nimmo, Camus, Ortiz, Arturo Torres, Tan, Cedric C. S., Pang, Juanita, Acman, Mislav, Millard, James, Padayatchi, Nesri, Grant, Alison D., O鈥橠onnell, Max, Pym, Alex, Brynildsrud, Ola B., Eldholm, Vegard, Grandjean, Louis, Didelot, Xavier, Balloux, Fran莽ois and van Dorp, Lucy (2024) Genome Medicine, 16 (1). 34. doi: ISSN 1756-994X.
Carson, Jake, Keeling, Matthew James, Wyllie, David, Ribeca, Paolo, Didelot, Xavier and Hepp, Crystal (2024) Molecular Biology and Evolution, 41 (1). msad288. doi: ISSN 0737-4038.
Fotopoulou, Emily T., Jenkins, Claire, Barker, Clare R., Painset, Anais, Didelot, Xavier, Simbo, Ameze, Douglas, Amy, Godbole, Gauri, Jorgensen, Frieda, Gharbia, Saheer and McLauchlin, Jim (2024) Microbial Genomics, 10 (1). 001155. doi: ISSN 2057-5858.
Vale, Filipa F., HpGP Research Network, Roberts, Richard J., Kobayashi, Ichizo, Camargo, Constanza M. and Rabkin, Charles S. (2024) Gut Microbes, 16 (1). 2379440. doi: ISSN 1949-0976.
Torres Ortiz, Arturo, Kendall, Michelle, Storey, Nathaniel, Hatcher, James, Dunn, Helen, Roy, Sunando, Williams, Rachel, Williams, Charlotte, Goldstein, Richard A., Didelot, Xavier, Harris, Kathryn, Breuer, Judith and Grandjean, Louis (2023) eLife, 12 . doi: ISSN 2050-084X.
Helekal, David, Keeling, Matthew James, Grad, Yonatan H. and Didelot, Xavier (2023) Journal of the Royal Society Interface, 20 (203). 20230074. doi: ISSN 1742-5662.
Didelot, Xavier (2023) In: Nordenfelt, P. and Collin, M., (eds.) Bacterial Pathogenesis. Methods in Molecular Biology, 2674 . New York, NY: Humana, pp. 87-99. ISBN 9781071632420
Didelot, Xavier, Franceschi, Vinicius, Frost, Simon D. W., Dennis, Ann and Volz, Erik M. (2023) Virus Evolution, 9 (1). vead028. doi: ISSN 2057-1577.
Samy, Abdallah M., Esquivel Gomez, Luis Roger, Savin, Cyril, Andrianaivoarimanana, Voahangy, Rahajandraibe, Soloandry, Randriantseheno, Lovasoa Nomena, Zhou, Zhemin, Kocher, Arthur, Didelot, Xavier, Rajerison, Minoarisoa and K眉hnert, Denise (2023) PLoS Neglected Tropical Diseases, 17 (5). e0010362. doi: ISSN 1935-2727.
Dingle, Kate E., Freeman, Jane, Didelot, Xavier, Quan, T. Phuong, Eyre, David W., Swann, Jeremy, Spittal, William D., Clark, Emma V., Jolley, Keith A., Walker, A. Sarah, Wilcox, Mark H. and Crook, Derrick W. (2023) mBio, 14 (2). e00243-23. doi: ISSN 2150-7511.
Kendall, Michelle, Tsallis, Daphne, Wymant, Chris, Di Francia, Andrea, Balogun, Yakubu, Didelot, Xavier, Ferretti, Luca and Fraser, Christophe (2023) Nature Communications, 14 (1). 858. doi: ISSN 2041-1723.
Mughal, Sadaf Rasheed, Niazi, Sadia Ambreen, Do, Thuy, Gilbert, Steven C., Didelot, Xavier, Radford, David R. and Beighton, David (2023) Microorganisms, 11 (2). 254. doi: ISSN 2076-2607.
Abdel-Glil, Mostafa Y., Hotzel, Helmut, Tomaso, Herbert, Didelot, Xavier, Brandt, Christian, Seyboldt, Christian, Linde, J枚rg, Schwarz, Stefan, Neubauer, Heinrich and El-Adawy, Hosny (2023) Frontiers In Veterinary Science, 9 . 1069062. doi: ISSN 2297-1769.
Didelot, Xavier, Helekal, David, Kendall, Michelle, Ribeca, Paolo and Schwartz, Russell (2023) Bioinformatics, 39 (1). btac761. doi: ISSN 1367-4803.
Didelot, Xavier and Parkhill, Julian (2022) Philosophical Transactions of the Royal Society B: Biological Sciences, 377 (1861). 20210246. doi: ISSN 0962-8436.
Didelot, Xavier and Evans, Charles Morris (2022) PLoS One, 17 (8). e0272278. doi: ISSN 1932-6203.
Whittles, Lilith K., Didelot, Xavier and White, Peter J. (2022) The Lancet. Infectious diseases, 22 (7). pp. 1030-1041. doi: ISSN 1474-4457.
Volk, Denis, Yang-Turner, Fan, Didelot, Xavier, Crook, Derrick W. and Wyllie, David (2022) Microbial Genomics, 8 (6). 000850. doi: ISSN 2057-5858.
Ledda, Alice, Cummins, Martina, Shaw, Liam P., Jauneikaite, Elita, Cole, Kevin, Lasalle, Florent, Barry, Deborah, Turton, Jane, Rosmarin, Caryn, Anaraki, Sudy, Wareham, David, Stoesser, Nicole, Paul, John, Manuel, Rohini, Cherian, Benny P. and Didelot, Xavier (2022) Microbial Genomics, 8 (4). doi: ISSN 2057-5858.
Wang, Liang, Didelot, Xavier, Bi, Yuhai and Gao, George F. (2022) Briefings in Bioinformatics, 23 (2). bbab594. doi: ISSN 1467-5463.
Fountain-Jones, Nicholas M., Kraberger, Simona, Gagne, Roderick B., Gilbertson, Marie L. J., Trumbo, Daryl R., Charleston, Michael, Salerno, Patricia E., Chris Funk, W., Crooks, Kevin, Logan, Kenneth, Alldredge, Mathew, Dellicour, Simon, Baele, Guy, Didelot, Xavier, VandeWoude, Sue, Carver, Scott and Craft, Meggan E. (2022) Nature Ecology & Evolution . pp. 174-182. doi: ISSN 2397-334X.
Willgert, Katriina, Didelot, Xavier, Surendran-Nair, Meera, Kuchipudi, Suresh V., Ruden, Rachel M., Yon, Michele, Nissly, Ruth H., Vandegrift, Kurt J., Nelli, Rahul K., Li, Lingling, Jayarao, Bhushan M., Levine, Nicole, Olsen, Randall J., Davis, James J., Musser, James M., Hudson, Peter J., Kapur, Vivek and Conlan, Andrew J. K. (2022) Scientific Reports, 12 (1). 12094. doi: ISSN 2045-2322.
Torres Ortiz, Arturo, Coronel, Jorge, Vidal, Julia Rios, Bonilla, Cesar, Moore, David A. J., Gilman, Robert H., Balloux, Francois, Kon, Onn Min, Didelot, Xavier and Grandjean, Louis (2021) Nature Communications, 12 (1). 7312. doi: ISSN 2041-1723.
Helekal, David, Ledda, Alice, Volz, Erik, Wyllie, David and Didelot, Xavier (2021) Systematic Biology, 71 (5). pp. 1073-1087. syab095. doi: ISSN 1076-836X.
Knight, Daniel R., Imwattana, Korakrit, Kullin, Brian, Guerrero-Araya, Enzo, Paredes-Sabja, Daniel, Didelot, Xavier, Dingle, Kate E., Eyre, David W., Rodr铆guez, C茅sar Cabrera and Riley, Thomas V. (2021) eLife, 10 . e64325. doi: ISSN 2050-084X.
Wang, Liang, Didelot, Xavier, Bi, Yuhai and Gao, George F. (2021) The Innovation . 100128. doi: ISSN 2666-6758.
Didelot, Xavier (2021) In: Mengoni, Alessio and Bacci, Giovanni and Fondi, Marco, (eds.) Bacterial Pangenomics : Methods and Protocols. Methods in Molecular Biology, 2242 . Springer US, pp. 205-220. ISBN 9781071610985
Didelot, Xavier, Kendall, Michelle, Xu, Yuanwei, White, Peter J. and McCarthy, Noel D. (2021) Current Protocols, 1 (2). e60. doi: ISSN 2691-1299.
Didelot, Xavier, Siveroni, Igor and Volz, Erik M. (2021) Molecular Biology and Evolution, 38 (1). pp. 307-317. msaa193. doi: ISSN 1537-1719.
Lassalle, Florent, Dastgheib, Seyed M. M., Zhao, Fang-Jie, Zhang, Jun, Verbarg, Susanne, Fr眉hling, Anja, Brinkmann, Henner, Osborne, Thomas H., Sikorski, Johannes, Balloux, Francois, Didelot, Xavier, Santini, Joanne M. and Petersen, J枚rn (2021) Systematic and Applied Microbiology, 44 (1). 126165. doi: ISSN 0723-2020.
Hennart, Melanie, Panunzi, Leonardo G., Rodrigues, Carla, Gaday, Quentin, Baines, Sarah L., Barros-Pinkelnig, Marina, Carmi-Leroy, Annick, Dazas, Melody, Wehenkel, Anne Marie, Didelot, Xavier, Toubiana, Julie, Badell, Edgar and Brisse, Sylvain (2020) Genome Medicine, 12 (1). 107. doi: ISSN 1756-994X.
Osnes, Magnus N., Didelot, Xavier, Korne-Elenbaas, Jolinda de, Alfsnes, Kristian, Brynildsrud, Ola B., Syversen, Gaute, Nilsen, 脴ivind Jul, De Blasio, Birgitte Freiesleben, Caugant, Dominique A. and Eldholm, Vegard (2020) Microbial Genomics, 6 (12). doi: ISSN 2057-5858.
Vegvari, Carolin, Grad, Yonatan H., White, Peter J., Didelot, Xavier, Whittles, Lilith K., Scangarella-Oman, Nicole E., Mitrani-Gold, Fanny S., Dumont, Etienne, Perry, Caroline R., Gilchrist, Kim, Hossain, Mohammad, Mortimer, Tatum D., Anderson, Roy M. and Gardiner, David (2020) Eurosurveillance, 25 (43). doi: ISSN 1560-7917.
Whittles, Lilith K., White, Peter J. and Didelot, Xavier (2020) Clinical Infectious Diseases, 71 (8). pp. 1912-1919. ciz1241. doi: ISSN 1058-4838.
Janezic, Sandra, Dingle, Kate, Alvin, Joseph, Accetto, Toma啪, Didelot, Xavier, Crook, Derrick W., Lacy, D. Borden and Rupnik, Maja (2020) Microbial Genomics, 6 (10). doi: ISSN 2057-5858.
Wang, Liang, Didelot, Xavier, Yang, Jing, Wong, Gary, Shi, Yi, Liu, Wenjun, Gao, George F. and Bi, Yuhai (2020) Nature Communications, 11 (1). 5006. doi: ISSN 2041-1723.
Volz, Erik M., Wiuf, Carsten, Grad, Yonatan H., Frost, Simon D. W., Dennis, Ann M. and Didelot, Xavier (2020) Systematic Biology, 69 (5). pp. 884-896. doi: ISSN 1063-5157.
Fountain-Jones, Nicholas M., Appaw, Raima Carol, Carver, Scott, Didelot, Xavier, Volz, Erik and Charleston, Michael (2020) Virus Evolution, 6 (2). veaa082. doi: ISSN 2057-1577.
Rodriguez-Manzano, Jesus, Moser, Nicolas, Malpartida-Cardenas, Kenny, Moniri, Ahmad, Fisarova, Lenka, Pennisi, Ivana, Boonyasiri, Adhiratha, Jauneikaite, Elita, Abdolrasouli, Alireza, Otter, Jonathan A., Bolt, Frances, Davies, Frances, Didelot, Xavier, Holmes, Alison and Georgiou, Pantelis (2020) Scientific Reports, 10 (1). 8448 . doi: ISSN 2045-2322.
Lassalle, Florent and Didelot, Xavier (2020) In: Tettelin, H. and Medini, D., (eds.) The Pangenome. Cham: Springer, pp. 129-149. ISBN 9783030382803
Wang, Haoqiu, Yang, Chao, Sun, Zhou, Zheng, Wei, Zhang, Wei, Yu, Hua, Wu, Yarong, Didelot, Xavier, Yang, Ruifu, Pan, Jingcao and Cui, Yujun (2020) PLOS Neglected Tropical Diseases, 14 (2). e0008046. doi: ISSN 1935-2735.
Klinkenberg, Don, Colijn, Caroline and Didelot, Xavier (2019) In: Held, Leonhard and Hens, Niel and O'Neill, Philip D. and Wallinga, Jacco, (eds.) Handbook of Infectious Disease Data Analysis. Chapman & Hall/CRC Handbooks of Modern Statistical Methods . Milton: CRC Press. ISBN 9781138626713
Zhao, Lin, Chen, Hongyou, Didelot, Xavier, Li, Zhenpeng, Li, Yinghui, Chen, Meiling, Du, Yu, Zhao, Hongqun, Liu, Jie, Hu, Qinghua, Kan, Biao, Chen, Min and Pang, Bo (2019) Microbial Genomics, 6 (12). doi: ISSN 2057-5858.
Criscuolo, Alexis, Issenhuth-Jeanjean, Sylvie, Didelot, Xavier, Thorell, Kaisa, Hale, James, Parkhill, Julian, Thomson, Nicholas R., Weill, Fran莽ois-Xavier, Falush, Daniel and Brisse, Sylvain (2019) Microbial Genomics, 5 (8). doi: ISSN 2057-5858.
Didelot, Xavier and Pouwels, Koen B. (2019) Nature Medicine, 25 (7). pp. 1033-1034. doi: ISSN 1078-8956.
Ailloud, Florent, Didelot, Xavier, Woltemate, Sabrina, Pfaffinger, Gudrun, Overmann, J枚rg, Bader, Ruth Christiane, Schulz, Christian, Malfertheiner, Peter and Suerbaum, Sebastian (2019) Nature Communications, 10 (1). 2273 . doi: ISSN 2041-1723.
Moniri, Ahmad, Rodriguez-Manzano, Jesus, Malpartida-Cardenas, Kenny, Yu, Ling-Shan, Didelot, Xavier, Holmes, Alison and Georgiou, Pantelis (2019) Analytical Chemistry, 91 (11). pp. 7426-7434. doi: ISSN 1520-6882.
Eyre, David W., Didelot, Xavier, Buckley, Anthony M., Freeman, Jane, Moura, Ines B., Crook, Derrick W., Peto, Tim E.A., Walker, A. Sarah, Wilcox, Mark H. and Dingle, Kate E. (2019) EBioMedicine, 43 . pp. 347-355. doi: ISSN 2352-3964.
Dorp, Lucy van, Wang, Qi, Shaw, Liam P., Acman, Mislav, Brynildsrud, Ola B., Eldholm, Vegard, Wang, Ruobing, Gao, Hua, Yin, Yuyao, Chen, Hongbin, Ding, Chuling, Farrer, Rhys A., Didelot, Xavier, Balloux, Francois and Wang, Hui (2019) Microbial Genomics, 5 (4). doi: ISSN 2057-5858.
Dingle, Kate E., Didelot, Xavier, Quan, T. Phuong, Eyre, David W., Stoesser, Nicole, Marwick, Charis A., Coia, John, Brown, Derek, Buchanan, Sarah, Ijaz, Umer Z., Goswami, Cosmika, Douce, Gill, Fawley, Warren N., Wilcox, Mark H., Peto, Timothy E. A., Walker, A. Sarah, Crook, Derrick W. and Keim, Paul (2019) mBio, 10 (2). pp. 1-19. e02790. doi: ISSN 2150-7511.
Ferrari, Matthew (Matt), Whittles, Lilith K., White, Peter J. and Didelot, Xavier (2019) PLoS Computational Biology, 15 (3). e1006748. doi: ISSN 1553-7358.
Ozer, Egon A., Nnah, Ekpeno, Didelot, Xavier, Whitaker, Rachel J. and Hauser, Alan R. (2019) Genome Biology and Evolution, 11 (1). pp. 1780-1796. doi: ISSN 1759-6653.
Didelot, Xavier, Croucher, Nicholas J., Bentley, Stephen D., Harris, Simon R. and Wilson, Daniel J. (2018) Nucleic Acids Research, 46 (22). e134. doi: ISSN 0305-1048.
Pandey, Anish, Cleary, David W., Laver, Jay R., Gorringe, Andrew, Deasy, Alice M., Dale, Adam P., Morris, Paul D., Didelot, Xavier, Maiden, Martin C. J. and Read, Robert C. (2018) Nature Communications, 9 (1). 4753. doi: ISSN 2041-1723.
Campbell, Finlay, Didelot, Xavier, Fitzjohn, Rich, Ferguson, Neil, Cori, Anne and Jombart, Thibaut (2018) BMC Bioinformatics, 19 (Supplement 11). 363. doi: ISSN 1471-2105.
S茅raphin, Marie Nancy, Khan, Md. Siddiqur Rahman, Didelot, Xavier, Morris, J. Glenn, Nolan, David J., Murray, Ellen R., Salemi, Marco, Lauzardo, Michael and May, Justin R. (2018) The American Journal of Tropical Medicine and Hygiene, 99 (4). doi: ISSN 0002-9637.
Yahara, Koji, Nakayama, Shu-ichi, Shimuta, Ken, Lee, Ken-ichi, Morita, Masatomo, Kawahata, Takuya, Kuroki, Toshiro, Watanabe, Yuko, Ohya, Hitomi, Yasuda, Mitsuru, Deguchi, Takashi, Didelot, Xavier and Ohnishi, Makoto (2018) Microbial Genomics, 4 (8). doi: ISSN 2057-5858.
Whittles, Lilith, White, Peter, Paul, John and Didelot, Xavier (2018) Antibiotics, 7 (3). 60. doi: ISSN 2079-6382.
Volz, Erik M. and Didelot, Xavier (2018) Systematic Biology, 67 (4). pp. 719-728. doi: ISSN 1063-5157.
Whittles, Lilith K., Didelot, Xavier, Grad, Yonatan H. and White, Peter J. (2018) The Lancet Infectious Diseases, 18 (7). pp. 716-717. doi: ISSN 1473-3099.
Wang, Ruobing, van Dorp, Lucy, Shaw, Liam P., Bradley, Phelim, Wang, Qi, Wang, Xiaojuan, Jin, Longyang, Zhang, Qing, Liu, Yuqing, Rieux, Adrien, Dorai-Schneiders, Thamarai, Weinert, Lucy Anne, Iqbal, Zamin, Didelot, Xavier, Wang, Hui and Balloux, Francois (2018) Nature Communications, 9 (1). 1179. doi: ISSN 2041-1723.
Collins, Caitlin and Didelot, Xavier (2018) PLoS Computational Biology, 14 (2). e1005958. doi: ISSN 1553-7358.
Whittles, Lilith K., White, Peter J. and Didelot, Xavier (2017) PLoS Medicine, 14 (10). e1002416. doi: ISSN 1549-1277.
Peters, Joanna, Cresswell, Fiona, Amor, Lauren, Cole, Kevin, Dean, Gillian, Didelot, Xavier, De Silva, Dilrini, Eyre, David W. and Paul, John (2017) Sexually Transmitted Infections, 94 (2). pp. 138-143. doi: ISSN 1472-3263.
Mostowy, Rafa艂 J., Croucher, Nicholas J., De Maio, Nicola, Chewapreecha, Claire, Salter, Susannah J., Turner, Paul, Aanensen, David M., Bentley, Stephen D., Didelot, Xavier and Fraser, Christophe (2017) Molecular Biology and Evolution, 34 (10). pp. 2537-2554. doi: ISSN 0737-4038.
Pascoe, Ben, M茅ric, Guillaume, Yahara, Koji, Wimalarathna, Helen, Murray, Susan, Hitchings, Matthew D., Sproston, Emma L., Carrillo, Catherine D., Taboada, Eduardo N., Cooper, Kerry K., Huynh, Steven, Cody, Alison J., Jolley, Keith A., Maiden, Martin C. J., McCarthy, Noel D., Didelot, Xavier, Parker, Craig T. and Sheppard, Samuel K. (2017) Molecular Ecology, 26 (17). pp. 4497-4508. doi: ISSN 0962-1083.
Pandey, Anish K., Cleary, David W., Laver, Jay R., Maiden, Martin C. J., Didelot, Xavier, Gorringe, Andrew and Read, Robert C. (2017) Standards in Genomic Sciences, 12 (1). 41. doi: ISSN 1944-3277.
Rosner, Bettina M., Schielke, Anika, Didelot, Xavier, Kops, Friederike, Breidenbach, Janina, Willrich, Niklas, G枚lz, Greta, Alter, Thomas, Stingl, Kerstin, Josenhans, Christine, Suerbaum, Sebastian and Stark, Klaus (2017) Scientific Reports, 7 (1). 5139. doi: ISSN 2045-2322.
Klinkenberg, Don, Backer, Jantien A., Didelot, Xavier, Colijn, Caroline and Wallinga, Jacco (2017) PLoS Computational Biology, 13 (5). e1005495. doi: ISSN 1553-7358.
Ledda, Alice, Price, James R., Cole, Kevin, Llewelyn, Martin J., Kearns, Angela M., Crook, Derrick W., Paul, John and Didelot, Xavier (2017) Journal of Antimicrobial Chemotherapy, 72 (5). pp. 1285-1288. doi: ISSN 0305-7453.
Didelot, Xavier, Fraser, Christophe, Gardy, Jennifer and Colijn, Caroline (2017) Molecular Biology and Evolution, 34 (4). pp. 997-1007. doi: ISSN 0737-4038.
Yang, Shangxin, Hemarajata, Peera, Hindler, Janet, Li, Fan, Adisetiyo, Helty, Aldrovandi, Grace, Sebra, Robert, Kasarskis, Andrew, MacCannell, Duncan, Didelot, Xavier, Russell, Dana, Rubin, Zachary and Humphries, Romney (2017) Clinical Infectious Diseases, 64 (7). pp. 894-901. doi: ISSN 1058-4838.
Didelot, Xavier, Whittles, Lilith K. and Hall, Ian (2017) Journal of The Royal Society Interface, 14 (131). 20170160. doi: ISSN 1742-5689.
Collins, Caitlin and Didelot, Xavier (2016) In: Nordenfelt, P. and Collin, M., (eds.) Bacterial Pathogenesis. Springer, pp. 109-137. ISBN 9781493966714
De Silva, Dilrini, Peters, Joanna, Cole, Kevin, Cole, Michelle J, Cresswell, Fiona, Dean, Gillian, Dave, Jayshree, Thomas, Daniel Rh, Foster, Kirsty, Waldram, Alison, Wilson, Daniel J, Didelot, Xavier, Grad, Yonatan H, Crook, Derrick W, Peto, Tim E A, Walker, A Sarah, Paul, John and Eyre, David W (2016) The Lancet Infectious Diseases, 16 (11). pp. 1295-1303. doi: ISSN 1473-3099.
Didelot, Xavier (2016) Significance, 13 (5). pp. 20-25. doi: ISSN 1740-9705.
Joseph, Sandeep J., Cox, Daniel, Wolff, Bernard, Morrison, Shatavia S., Kozak-Muiznieks, Natalia A., Frace, Michael, Didelot, Xavier, Castillo-Ramirez, Santiago, Winchell, Jonas, Read, Timothy D. and Dean, Deborah (2016) Scientific Reports, 6 (1). 33442. doi: ISSN 2045-2322.
Ansari, M. Azim and Didelot, Xavier (2016) Genetics, 204 (1). pp. 89-98. doi: ISSN 0016-6731.
Eldholm, Vegard, Rieux, Adrien, Monteserin, Johana, Lopez, Julia Montana, Palmero, Domingo, Lopez, Beatriz, Ritacco, Viviana, Didelot, Xavier and Balloux, Francois (2016) eLife, 5 . doi: ISSN 2050-084X.
Joseph, Sandeep J., Marti, Hanna, Didelot, Xavier, Read, Timothy D. and Dean, Deborah (2016) Genome Biology and Evolution, 8 (8). pp. 2613-2623. doi: ISSN 1759-6653.
Didelot, Xavier, Dordel, Janina, Whittles, Lilith K., Collins, Caitlin, Bilek, Nicole, Bishop, Cynthia J., White, Peter J., Aanensen, David M., Parkhill, Julian, Bentley, Stephen D., Spratt, Brian G. and Harris, Simon R. (2016) mBio, 7 (3). doi: ISSN 2150-7511.
Bubendorfer, Sebastian, Krebes, Juliane, Yang, Ines, Hage, Elias, Schulz, Thomas F., Bahlawane, Christelle, Didelot, Xavier and Suerbaum, Sebastian (2016) Nature Communications, 7 . 11995. doi: ISSN 2041-1723.
Hatherell, Hollie-Ann, Tang, Patrick, Pollock, Sue L., Didelot, Xavier, Johnston, James C., Gardy, Jennifer L., Crisan, Anamaria and Colijn, Caroline (2016) Microbial Genomics, 2 (5). doi: ISSN 2057-5858.
Whittles, Lilith K. and Didelot, Xavier (2016) Proceedings of the Royal Society B: Biological Sciences, 283 (1830). doi: ISSN 0962-8452.
Wielgoss, S茅bastien, Didelot, Xavier, Chaudhuri, Roy R, Liu, Xuan, Weedall, Gareth D, Velicer, Gregory J and Vos, Michiel (2016) The ISME Journal, 10 (10). pp. 2468-2477. doi: ISSN 1751-7362.
Yahara, Koji, Didelot, Xavier, Jolley, Keith A., Kobayashi, Ichizo, Maiden, Martin C. J., Sheppard, Samuel K. and Falush, Daniel (2016) Molecular Biology and Evolution, 33 (2). pp. 456-471. doi: ISSN 0737-4038.
Brown, Thomas, Didelot, Xavier, Maio, Nicola De and Wilson, Daniel J. (2016) Microbial Genomics, 2 (1). doi: ISSN 2057-5858.
Didelot, Xavier, Walker, A. Sarah, Peto, Tim E., Crook, Derrick W. and Wilson, Daniel J. (2016) Nature Reviews Microbiology, 14 (3). pp. 150-162. doi: ISSN 1740-1526.
Joseph, Sandeep J., Marti, Hanna, Didelot, Xavier, Castillo-Ramirez, Santiago, Read, Timothy D. and Dean, Deborah (2015) Genome Biology and Evolution, 7 (11). pp. 3070-3084. doi: ISSN 1759-6653.
Achtman, Mark, Zhou, Zhemin and Didelot, Xavier (2015) PLoS One, 10 (8). pp. 1-11. e0134435. doi: ISSN 1932-6203.
Montano, Valeria, Didelot, Xavier, Foll, Matthieu, Linz, Bodo, Reinhardt, Richard, Suerbaum, Sebastian, Moodley, Yoshan and Jensen, Jeffrey D. (2015) Genetics, 200 (3). pp. 947-963. doi: ISSN 0016-6731.
Cui, Yujun, Yang, Xianwei, Didelot, Xavier, Guo, Chenyi, Li, Dongfang, Yan, Yanfeng, Zhang, Yiquan, Yuan, Yanting, Yang, Huanming, Wang, Jian, Wang, Jun, Song, Yajun, Zhou, Dongsheng, Falush, Daniel and Yang, Ruifu (2015) Molecular Biology and Evolution, 32 (6). pp. 1396-1410. doi: ISSN 0737-4038.
Biek, Roman, Pybus, Oliver G., Lloyd-Smith, James O. and Didelot, Xavier (2015) Trends in Ecology & Evolution, 30 (6). pp. 306-313. doi: ISSN 0169-5347.
Didelot, Xavier, Pang, Bo, Zhou, Zhemin, McCann, Angela, Ni, Peixiang, Li, Dongfang, Achtman, Mark and Kan, Biao (2015) PLoS Genetics, Volume 11 (Number 3). pp. 1-14. Article number e1005072. doi: ISSN 1553-7390.
Prlic, Andreas, Didelot, Xavier and Wilson, Daniel J. (2015) PLoS Computational Biology, 11 (2). e1004041. doi: ISSN 1553-7358.
Mathers, Amy J., Stoesser, Nicole, Sheppard, Anna E., Pankhurst, Louise, Giess, Adam, Yeh, Anthony J., Didelot, Xavier, Turner, Stephen D., Sebra, Robert, Kasarskis, Andrew, Peto, Tim, Crook, Derrick and Sifri, Costi D. (2015) Antimicrobial Agents and Chemotherapy, 59 (3). pp. 1656-1663. doi: ISSN 0066-4804.
Ezewudo, Matthew N., Joseph, Sandeep J., Castillo-Ramirez, Santiago, Dean, Deborah, del Rio, Carlos, Didelot, Xavier, Dillon, Jo-Anne, Selden, Richard F., Shafer, William M., Turingan, Rosemary S., Unemo, Magnus and Read, Timothy D. (2015) PeerJ, 3 . e806. doi: ISSN 2167-8359.
Croucher, Nicholas J and Didelot, Xavier (2015) Current Opinion in Microbiology, 23 . pp. 62-67. doi: ISSN 1369-5274.
Cao, Qizhi, Didelot, Xavier, Wu, Zhongbiao, Li, Zongwei, He, Lihua, Li, Yunsheng, Ni, Ming, You, Yuanhai, Lin, Xi, Li, Zhen, Gong, Yanan, Zheng, Minqiao, Zhang, Minli, Liu, Jie, Wang, Weijun, Bo, Xiaochen, Falush, Daniel, Wang, Shengqi and Zhang, Jianzhong (2015) Gut, 64 (4). pp. 554-561. doi: ISSN 0017-5749.
Elliott, Briony, Dingle, Kate E., Didelot, Xavier, Crook, Derrick W. and Riley, Thomas V. (2014) Genome Biology and Evolution, 6 (12). pp. 3159-3170. doi: ISSN 1759-6653.
Krebes, Juliane, Didelot, Xavier, Kennemann, Lynn and Suerbaum, Sebastian (2014) International Journal of Medical Microbiology, 304 (8). pp. 1135-1146. doi: ISSN 1438-4221.
O'Brien, J. D., Didelot, Xavier, Iqbal, Z., Amenga-Etego, L., Ahiska, B. and Falush, D. (2014) Genetics, 197 (3). pp. 925-937. doi: ISSN 0016-6731.
Didelot, Xavier, Gardy, Jennifer and Colijn, Caroline (2014) Molecular Biology and Evolution, 31 (7). pp. 1869-1879. doi: ISSN 0737-4038.
Yahara, Koji, Didelot, Xavier, Ansari, M. Azim, Sheppard, Samuel K. and Falush, Daniel (2014) Molecular Biology and Evolution, 31 (6). pp. 1593-1605. doi: ISSN 0737-4038.
Everitt, Richard G., Didelot, Xavier, Batty, Elizabeth M., Miller, Ruth R, Knox, Kyle, Young, Bernadette C., Bowden, Rory, Auton, Adam, Votintseva, Antonina, Larner-Svensson, Hanna, Charlesworth, Jane, Golubchik, Tanya, Ip, Camilla L. C., Godwin, Heather, Fung, Rowena, Peto, Tim E. A., Walker, A. Sarah, Crook, Derrick W. and Wilson, Daniel J. (2014) Nature Communications, 5 (1). 3956. doi: ISSN 2041-1723.
Miller, R. R., Price, J. R., Batty, E. M., Didelot, Xavier, Wyllie, D., Golubchik, T., Crook, D. W., Paul, J., Peto, T. E. A., Wilson, D. J., Cule, M., Ip, C. L. C., Day, N. P. J., Moore, C. E., Bowden, R. and Llewelyn, M. J. (2014) Journal of Hospital Infection, 86 (2). pp. 83-89. doi: ISSN 0195-6701.
Haase, Jana K., Didelot, Xavier, Lecuit, Marc, Korkeala, Hannu and Achtman, Mark (2014) Environmental Microbiology, Volume 16 (Number 2). pp. 405-416. doi: ISSN 1462-2912.
Tanaka, Mark M., Jombart, Thibaut, Cori, Anne, Didelot, Xavier, Cauchemez, Simon, Fraser, Christophe and Ferguson, Neil (2014) PLoS Computational Biology, 10 (1). e1003457. doi: ISSN 1553-7358.
Didelot, Xavier (2014) Expert Review of Anti-infective Therapy, 11 (4). pp. 335-337. doi: ISSN 1478-7210.
Krause, David J., Didelot, Xavier, Cadillo-Quiroz, Hinsby and Whitaker, Rachel J. (2014) Genome Biology and Evolution, 6 (1). pp. 170-178. doi: ISSN 1759-6653.
Dingle, K. E., Elliott, Bryony Clare, Robinson, Esther R., Griffiths, David, Eyre, D. W., Stoesser, N., Vaughan, A., Golubchik, Tanya, Fawley, W. N., Wilcox, M., Peto, T. E., Walker, S. A., Riley, T, Crook, Derrick and Didelot, Xavier (2014) Genome Biology, 6 (1). pp. 36-52. doi: ISSN 1474-7596.
Ansari, M. Azim and Didelot, Xavier (2014) Genetics, 196 (1). pp. 253-265. doi: ISSN 0016-6731.
Dingle, Kate E., Elliott, Briony, Robinson, Esther, Griffiths, David, Eyre, David W., Stoesser, Nicole, Vaughan, Alison, Golubchik, Tanya, Fawley, Warren N., Wilcox, Mark H., Peto, Timothy E., Walker, A. Sarah, Riley, Thomas V., Crook, Derrick W. and Didelot, Xavier (2013) Genome Biology and Evolution, 6 (1). pp. 36-52. doi: ISSN 1759-6653.
Price, J. R., Didelot, Xavier, Crook, D. W., Llewelyn, M. J. and Paul, J. (2013) Journal of Hospital Infection, 83 (1). pp. 14-21. doi: ISSN 0195-6701.
Read, T. D., Joseph, S. J., Didelot, Xavier, Liang, B., Patel, L. and Dean, D. (2013) mBio, 4 (2). doi: ISSN 2150-7511.
de Muinck, Eric J., Lagesen, Karin, Afset, Jan Egil, Didelot, Xavier, R酶nningen, Kjersti S., Rudi, Knut, Stenseth, Nils Chr and Trosvik, P氓l (2013) BMC Genomics, 14 (1). p. 81. doi: ISSN 1471-2164.
Robinson, Esther R., Didelot, Xavier, Hood, Derek and Crook, Derrick (2013) In: Spring Meeting for Clinician Scientists in Training. Published in: The Lancet, 381 (S1). S93. doi: ISSN 0140-6736.
Sheppard, S. K., Didelot, Xavier, Meric, G., Torralbo, A., Jolley, K. A., Kelly, D. J., Bentley, S. D., Maiden, M. C. J., Parkhill, J. and Falush, D. (2013) Proceedings of the National Academy of Sciences, 110 (29). pp. 11923-11927. doi: ISSN 0027-8424.
Didelot, Xavier, Nell, Sandra, Yang, Ines, Woltemate, Sabrina, van der Merwe, Schalk and Suerbaum, Sebastian (2013) Proceedings of the National Academy of Sciences of the United States of America, 110 (34). pp. 13880-13885. doi: ISSN 0027-8424.
Behrens, Wiebke, Schweinitzer, Tobias, Bal, Joena, Dorsch, Martina, Bleich, Andr茅, Kops, Friederike, Brenneke, Birgit, Didelot, Xavier, Suerbaum, Sebastian, Josenhans, Christine and Blanke, S. R. (2013) Infection and Immunity, 81 (10). pp. 3534-3551. doi: ISSN 0019-9567.
Dingle, Kate E., Didelot, Xavier, Ansari, M. Azim, Eyre, David W., Vaughan, Alison, Griffiths, David, Ip, Camilla L. C., Batty, Elizabeth M., Golubchik, Tanya, Bowden, Rory, Jolley, Keith A., Hood, Derek W., Fawley, Warren N., Walker, A. Sarah, Peto, Timothy E., Wilcox, Mark H. and Crook, Derrick W. (2012) The Journal of Infectious Diseases, 207 (4). pp. 675-686. doi: ISSN 0022-1899.
Didelot, Xavier, Bowden, Rory, Wilson, Daniel J., Peto, Tim E. A. and Crook, Derrick W. (2012) Nature Reviews Genetics , 13 (9). pp. 601-612. doi: ISSN 1471-0056.
Zhang, Liangfen, Thomas, Jonathan C., Didelot, Xavier and Robinson, D. Ashley (2012) Journal of Molecular Evolution, 75 (1-2). pp. 43-54. doi: ISSN 0022-2844.
Achtman, Mark, Wain, John, Weill, Fran莽ois-Xavier, Nair, Satheesh, Zhou, Zhemin, Sangal, Vartul, Krauland, Mary G., Hale, James L., Harbottle, Heather, Uesbeck, Alexandra, Dougan, Gordon, Harrison, Lee H. and Brisse, Sylvain (2012) PLoS Pathogens, Volume 8 (Number 6). Article number e1002776. doi: ISSN 1553-7374.
Didelot, Xavier, M茅ric, Guillaume, Falush, Daniel and Darling, Aaron E (2012) BMC Genomics, 13 (1). p. 256. doi: ISSN 1471-2164.
Moccia, Claudia, Krebes, Juliane, Kulick, Stefan, Didelot, Xavier, Kraft, Christian, Bahlawane, Christelle and Suerbaum, Sebastian (2012) BMC Microbiology, 12 (1). 67. doi: ISSN 1471-2180.
Barton, Nick H., Cadillo-Quiroz, Hinsby, Didelot, Xavier, Held, Nicole L., Herrera, Alfa, Darling, Aaron, Reno, Michael L., Krause, David J. and Whitaker, Rachel J. (2012) PLoS Biology, 10 (2). e1001265. doi: ISSN 1545-7885.
Namouchi, A., Didelot, Xavier, Schock, U., Gicquel, B. and Rocha, E. P. C. (2012) Genome Research, 22 (4). pp. 721-734. doi: ISSN 1088-9051.
Zwick, M. E., Joseph, S. J., Didelot, Xavier, Chen, P. E., Bishop-Lilly, K. A., Stewart, A. C., Willner, K., Nolan, N., Lentz, S., Thomason, M. K., Sozhamannan, S., Mateczun, A. J., Du, L. and Read, T. D. (2012) Genome Research, 22 (8). pp. 1512-1524. doi: ISSN 1088-9051.
Joseph, Sandeep J., Didelot, Xavier, Rothschild, James, de Vries, Henry J.C., Morr茅, Servaas A., Read, Timothy D. and Dean, Deborah (2012) Molecular Biology and Evolution, 29 (12). pp. 3933-3946. doi: ISSN 0737-4038.
Joseph, Sandeep J., Didelot, Xavier, Gandhi, Khanjan, Dean, Deborah and Read, Timothy D. (2011) Biology Direct, 6 (1). p. 28. doi: ISSN 1745-6150.
Dingle, Kate E., Griffiths, David, Didelot, Xavier, Evans, Jessica, Vaughan, Alison, Kachrimanidou, Melina, Stoesser, Nicole, Jolley, Keith A., Golubchik, Tanya, Harding, Rosalind M., Peto, Tim E., Fawley, Warren, Walker, A. Sarah, Wilcox, Mark and Crook, Derrick W. (2011) PLoS One, 6 (5). e19993. doi: ISSN 1932-6203.
Kennemann, L., Didelot, Xavier, Aebischer, T., Kuhn, S., Drescher, B., Droege, M., Reinhardt, R., Correa, P., Meyer, T. F., Josenhans, C., Falush, D. and Suerbaum, S. (2011) Proceedings of the National Academy of Sciences, 108 (12). pp. 5033-5038. doi: ISSN 0027-8424.
Didelot, Xavier, Everitt, Richard G., Johansen, Adam M. and Lawson, Daniel J. (2011) Bayesian Analysis, Vol.6 (No.1). pp. 49-76. doi: ISSN 1931-6690.
Laukkanen-Ninios, Riikka, Didelot, Xavier, Jolley, Keith A., Morelli, Giovanna, Sangal, Vartul, Kristo, Paula, Brehony, Carina, Imori, Priscilla F. M., Fukushima, Hiroshi, Siitonen, Anja, Tseneva, Galina, Voskressenskaya, Ekaterina, Falcao, Juliana P., Korkeala, Hannu, Maiden, Martin C. J., Mazzoni, Camila, Carniel, Elisabeth, Skurnik, Mikael and Achtman, Mark (2011) Environmental Microbiology, 13 (12). pp. 3114-3127. doi: ISSN 1462-2912.
Didelot, Xavier, Bowden, Rory, Street, Teresa, Golubchik, Tanya, Spencer, Chris, McVean, Gil, Sangal, Vartul, Anjum, Muna F., Achtman, Mark, Falush, Daniel and Donnelly, Peter (2011) PLoS Genetics, Volume 7 (Number 7). Article number e1002191. doi: ISSN 1553-7390.
Morelli, Giovanna, Didelot, Xavier, Kusecek, Barica, Schwarz, Sandra, Bahlawane, Christelle, Falush, Daniel, Suerbaum, Sebastian and Achtman, Mark (2010) PL o S Genetics, Vol.6 (No.7). doi: ISSN 1553-7390.
Didelot, Xavier and Maiden, Martin C. J. (2010) Trends in Microbiology, Vol.18 (No.7). pp. 315-322. ISSN 0966-842X doi:
Didelot, Xavier, Everitt, Richard G., Johansen, Adam M. and Lawson, Daniel J. (2010) Working Paper. Coventry: 神马福利影片. Centre for Research in Statistical Methodology. Working papers, Vol.2010 (No.12).
Sangal, V., Harbottle, H., Mazzoni, C. J., Helmuth, R., Guerra, B., Didelot, Xavier, Paglietti, B., Rabsch, W., Brisse, S., Weill, F.-X., Roumagnac, P. and Achtman, M. (2010) Journal of Bacteriology, 192 (24). pp. 6465-6476. doi: ISSN 0021-9193.
Didelot, Xavier, Lawson, D., Darling, A. and Falush, D. (2010) Genetics, 186 (4). pp. 1435-1449. doi: ISSN 0016-6731.
Zhang, Junlong, Zhang, F. (Fang), Didelot, Xavier, Bruce, Kimberley D., Cagampang, Felino R., Vatish, Manu, Hanson, Mark A., Lehnert, Hendrik, Ceriello, Antonio and Byrne, Christopher D. (2009) BMC Genomics, Vol.10 (No.478). doi: ISSN 1471-2164.
Didelot, Xavier, Urwin, Rachel, Maiden, Martin C. J. and Falush, Daniel (2009) Microbiology, Vol.15 (No.10). pp. 3176-3186. doi: ISSN 1350-0872.
Didelot, Xavier, Lawson, Daniel J. and Falush, Daniel (2009) Bioinformatics, Vol.25 (No.11). pp. 1442-1444. doi: ISSN 1367-4803.
Didelot, Xavier, Barker, Margaret, Falush, Daniel and Priest, Fergus G. (2009) Systematic and Applied Microbiology, Vol.32 (No.2). pp. 81-90. doi: ISSN 0723-2020.
Didelot, Xavier, Darling, Aaron and Falush, Daniel (2009) Genome Research, Vol.19 (No.2). pp. 306-317. doi: ISSN 1088-9051.
Vos, Michiel and Didelot, Xavier (2009) ISME Journal, Vol.3 (No.2). pp. 199-208. doi: ISSN 1751-7362.
Vos, Michiel and Didelot, Xavier (2009) The ISME Journal, 3 (2). pp. 199-208. doi: ISSN 1751-7362.
Kulick, Stefan, Moccia, Claudia, Didelot, Xavier, Falush, Daniel, Kraft, Christian and Suerbaum, Sebastian (2008) PLOS One, Vol.3 (No.11). doi: ISSN 1932-6203.
den Bakker, Henk C., Didelot, Xavier, Fortes, Esther D, Nightingale, Kendra K and Wiedmann, Martin (2008) BMC Evolutionary Biology, Vol. 8 (No. 27). doi: ISSN 1471-2148.
Kennemann, L., Didelot, Xavier, Drescher, B., Kuhn, S., Olbermann, P., Falush, Daniel, Droege, M., Josenhans, C. and Suerbaum, Sebastian (2008) In: 60th Annual Meeting of the Deutschen-Gesellschaft-fur-Hygiene-und-Mikrobiologie, Dresden, Germany, Sep 21-24, 2008. Published in: International Journal of Medical Microbiology, Vol.298 (Suppl.2). p. 26. ISSN 1438-4221.
Moccia, C., Kulick, S., Didelot, Xavier, Ellrott, K., Kraft, C. and Suerbaum, Sebastian (2008) In: 60th Annual Meeting of the Deutschen-Gesellschaft-fur-Hygiene-und-Mikrobiologie, Dresden, Germany, Sep 21-24, 2008. Published in: International Journal of Medical Microbiology, Vol.298 (Suppl.2). p. 29. ISSN 1438-4221.
Didelot, Xavier and Falush, D. (2007) Genetics, 175 (3). pp. 1251-1266. doi: ISSN 0016-6731.
Falush, D., Torpdahl, M., Didelot, Xavier, Conrad, D. F., Wilson, D. J. and Achtman, Mark (2006) Philosophical Transactions of the Royal Society B: Biological Sciences, 361 (1475). pp. 2045-2053. doi: ISSN 0962-8436.
Didelot, Xavier, Achtman, Mark, Parkhill, J., Thomson, N. R. and Falush, D. (2006) Genome Research, 17 (1). pp. 61-68. doi: ISSN 1088-9051.
Roberts, Ian, Everitt, Richard G., Koskela, Jere and Didelot, Xavier (2025) PLoS Computational Biology, 21 (4). e1012995. doi: ISSN 1553-7358.
| Title | Funder | Award start | Award end |
| NIHR HPRU in Gastrointestinal Infections | National Institute for Health Research (NIHR DoH) | 01 April 2020 | 30 September 2025 |
| Broad species surveillance, sequencing, and transmission dynamics of SARS-CoV-2 in non-human animals | US Department of Agriculture Animal and Plant Health Inspection Service | 01 August 2023 | 31 July 2025 |
| HPRU in Genomics and Enabling at 神马福利影片 | National Institute for Health Research (DoH) | 01 April 2020 | 31 March 2025 |
| Real-time phylogenetics using sequential Monte Carlo with tree sequences | EPSRC | 01 June 2022 | 31 May 2023 |
| COVID-19 Intervention modelling for East Africa (CIMEA) (linked to 67166) | Wellcome Trust | 27 May 2020 | 26 May 2022 |
I am happy to receive enquires about PG Research projects in my group, please contact me at the above email address.